Basic Statistics
Measure | Value |
---|---|
Filename | SRR2093872_2.fastq.gz |
File type | Conventional base calls |
Encoding | Sanger / Illumina 1.9 |
Total Sequences | 7366523 |
Sequences flagged as poor quality | 0 |
Sequence length | 100 |
%GC | 34 |
Per base sequence quality
Per tile sequence quality
Per sequence quality scores
Per base sequence content
Per sequence GC content
Per base N content
Sequence Length Distribution
Sequence Duplication Levels
Overrepresented sequences
No overrepresented sequences
Adapter Content
Kmer Content
Sequence | Count | PValue | Obs/Exp Max | Max Obs/Exp Position |
---|---|---|---|---|
CGATAAC | 22555 | 0.0 | 70.87648 | 1 |
GATAACT | 23660 | 0.0 | 67.86449 | 2 |
GCATAAC | 17605 | 0.0 | 67.50921 | 1 |
CATAACT | 18790 | 0.0 | 63.401886 | 2 |
TCGGGGG | 1545 | 0.0 | 31.993198 | 38-39 |
GGGCGCC | 1045 | 0.0 | 30.825739 | 42-43 |
CTCGGGG | 750 | 0.0 | 30.757906 | 36-37 |
GGCGCCG | 770 | 0.0 | 29.590496 | 44-45 |
GGGTCGC | 465 | 0.0 | 28.316807 | 42-43 |
TCTCGGG | 705 | 0.0 | 26.043385 | 36-37 |
GGGGCGC | 870 | 0.0 | 25.134653 | 42-43 |
GTCGCCG | 1895 | 0.0 | 24.171114 | 44-45 |
TCCGGGG | 580 | 0.0 | 23.943678 | 38-39 |
GGCGCCC | 550 | 0.0 | 23.062284 | 44-45 |
GATCTCG | 2470 | 0.0 | 22.269709 | 34-35 |
CCGGGGG | 705 | 0.0 | 21.701565 | 38-39 |
GAGCGGC | 1120 | 0.0 | 21.404448 | 9 |
GGCCGGG | 305 | 0.0 | 20.805302 | 12-13 |
CGTCGGG | 340 | 0.0 | 20.737309 | 12-13 |
GATCGGA | 4775 | 0.0 | 20.684248 | 1 |